| This is a dataset describes transcript expression based on the data |
| from [GTEX](https://gtexportal.org/home/downloads/adult-gtex/bulk_tissue_expression) ( |
| file: GTEx_Analysis_2017-06-05_v8_RSEMv1.3.0_transcript_tpm.gct.gz ) |
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| It measures the transcription level of each human transcripts ( 4-5 per genes ) in every |
| 31 tissues (for the V1, 50 more specific tissues for the V2). |
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| expression values are log-transformed ( x -> log(x+1) ) |
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| Each sample of the dataset correspond to: |
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| * A unique (gene_id, transcript_id) pair |
| * the quantified level of expressions across several tissues |
| * the DNA sequence |
| * the RNA sequence (ATCG format) |
| * the protein sequence |
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| ## Splits Statistics |
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| | | train | test | evaluation | |
| |--------------|-------|------|------------| |
| | # Genes | 17648 | 980 | 981 | |
| | # Transcript | 82205 | 4718 | 4318 | |
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| <img src="./tr_per_gene.png" width="512"/> |
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| <img src="./tr_expr_among_gene.png" width="512"/> |
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| ### NOTE |
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| We currently only included coding genes, there there the RNA is actually mRNA |
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